BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C03LP1|AL425495
(1035 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1044 1962 0.0
>3x_Contig1044
Length = 4552
Score = 1962 bits (987), Expect = 0.0
Identities = 1021/1029 (99%), Gaps = 4/1029 (0%)
Strand = Plus / Plus
Query: 1 atgaggaagaagacaaaactatagaaagtgagataggtattaaaagttgcacaatttggg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1196 atgaggaagaagacaaaactatagaaagtgagaaaggtattaaaagttgcacaatttggg 1255
Query: 61 aagtaccaatcaccagttgaacattatggcatgtcaggagtratgtatgaccatgttcca 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1256 aagtaccaatcaccagttgaacattatggcatgtcaggagtgatgtatgaccatgttcca 1315
Query: 121 gtattgtgacccacagtaaggatcaaaactccgtctgatgtaaaatggaacaaaataaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 gtattgtgacccacagtaaggatcaaaactccgtctgatgtaaaatggaacaaaataaag 1375
Query: 181 caaacggcctgcattgattagtatatagagctaccacaacatcatatccaacacagtatt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1376 caaacggcctgcattgattagtatat-gagctaccacaacatcatatccaacacagtatt 1434
Query: 241 aatggagttcatcaccctaacgttaaaggtctctcacatgtaataaagttgacgaaacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 aatggagttcatcaccctaacgttaaaggtctctcacatgtaataaagttgacgaaacga 1494
Query: 301 acgcatatgtccaattatttcccccaaaatgatgaacttcacaggatcaaattctttctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 acgcatatgtccaattatttcccccaaaatgatgaacttcacaggatcaaattctttctc 1554
Query: 361 aggtctatcttccatggaagttttcgcagaagcaatataaaatgaagccacttttactaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 aggtctatcttccatggaagttttcgcagaagcaatataaaatgaagccacttttactaa 1614
Query: 421 caagatcaaatcgattcgttgatattatttgagtagggtagagttagaaccaagaccgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 caagatcaaatcgattcgttgatattatttgagtagggtagagttagaaccaagaccgtc 1674
Query: 481 aagcgtgcctccaaggctttgattgamaagtactatccaaagttgaccatggatttccaa 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1675 aagcgtgcctccaaggctttgattgaaaagtactatccaaagttgaccatggatttccaa 1734
Query: 541 accaacaagagattgtgtgacgaaatcgctaccatccaatctaagagattgagaaacaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 accaacaagagattgtgtgacgaaatcgctaccatccaatctaagagattgagaaacaag 1794
Query: 601 attgctggttacaccacccatttgatgaagagaatccaaaagggtccagttagaggtatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1795 attgctggttacaccacccatttgatgaagagaatccaaaagggtccagttagaggtatt 1854
Query: 661 tccttcaagttgcaagaagaagaaagagaaagaaaggatcaatacgttccagatgtctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 tccttcaagttgcaagaagaagaaagagaaagaaaggatcaatacgttccagatgtctct 1914
Query: 721 gctttggacttgtctcactctaacgacgtcttgaacgttgacactcaaaccgctgaattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 gctttggacttgtctcactctaacgacgtcttgaacgttgacactcaaaccgctgaattg 1974
Query: 781 gtcaactctttgggtttgaagttgccattatccgtttcctctgtttctgctgttagagac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975 gtcaactctttgggtttgaagttgccattatccgtttcctctgtttctgctgttagagac 2034
Query: 841 agaagattcagaaaaagaaactaagcaattatcatctagaaaactttagttaataataaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 agaagattcagaaaaagaaactaagcaattatcatctagaaaactttagttaataataaa 2094
Query: 901 aagatgtaccatcctttttatttcttttgtatatgattctamagttgcttgtttaaatct 960
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2095 aagatgtaccatcctttttatttcttttgtatatgattctacagttgcttgtttaaatct 2154
Query: 961 ttaatcatcggtattcgatcattgttgt-aatccgtcattttagtcgg-gctgtatgag- 1017
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 2155 ttaatcatcggtattcgatcattgttgtaaatccgtcattttagtcggagctgtatgaga 2214
Query: 1018 agctaatac 1026
|||||||||
Sbjct: 2215 agctaatac 2223
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9565
Number of Sequences: 1807
Number of extensions: 9565
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 1035
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1019
effective length of database: 10,329,639
effective search space: 10525902141
effective search space used: 10525902141
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)